gatk-3.8/java/src/org/broadinstitute/sting/utils/interval
asivache 671ac00748 A simple utility class that implements a merging Iterator<GenomeLoc> built over an interval or bed file (this is NOT a rod, but rather a direct line-by-line file reader that converts strings to genome locs on the fly and merges overlapping intervals)
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3546 348d0f76-0448-11de-a6fe-93d51630548a
2010-06-14 15:54:37 +00:00
..
IntervalFileMergingIterator.java A simple utility class that implements a merging Iterator<GenomeLoc> built over an interval or bed file (this is NOT a rod, but rather a direct line-by-line file reader that converts strings to genome locs on the fly and merges overlapping intervals) 2010-06-14 15:54:37 +00:00
IntervalMergingRule.java Refactoring intervals, separating the process of parsing interval lists, 2010-04-13 15:50:38 +00:00
IntervalUtils.java trivial refactoring: isFile renamed to isIntervalFile and made public 2010-06-14 14:02:23 +00:00