gatk3的最后一个经典版本3.8

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Ami Levy-Moonshine 2ff0c23b53 fix missed NPE error in AssessNA12878. Add a check and an clear error message. add unitTest for that case (when a file has genotypes but does not NA12878 as a sample)		2013-11-14 14:59:47 -05:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Merge pull request #417 from broadinstitute/bt_pairhmm_api_cleanup2	2013-11-14 10:47:07 -08:00
public	Merge pull request #417 from broadinstitute/bt_pairhmm_api_cleanup2	2013-11-14 10:47:07 -08:00
settings	Modify gatkdoc template to handle downsampling info better	2013-09-26 14:50:32 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	Resolving warnings	2013-09-23 12:42:22 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Changing from scala 2.9.2 to 2.10.2.	2013-09-23 12:42:22 -04:00

The Genome Analysis Toolkit