gatk3的最后一个经典版本3.8

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Valentin Ruano-Rubio 2f79042dee Reduce intervals of integration tests in HaplotypeCallerIntegrationTest class Story: https://www.pivotaltracker.com/story/show/74858854 Changes: Intervals have been shrunk so that the test run in 15s or less.		2014-08-15 14:20:10 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Reduce intervals of integration tests in HaplotypeCallerIntegrationTest class	2014-08-15 14:20:10 -04:00
public	Removing an assumption that ADs were in the same order if the number of alleles matched. This happens for example when one sample is C->T and another sample is C->G.	2014-08-13 13:26:40 -04:00
settings/helpTemplates	Various documentation improvements	2014-07-14 12:03:03 -04:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Refactored maven directories and java packages replacing "sting" with "gatk".	2014-05-19 17:36:39 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Update pom versions to mark the start of GATK 3.3 development	2014-07-17 12:09:33 -04:00

The Genome Analysis Toolkit