22 lines
1.0 KiB
XML
22 lines
1.0 KiB
XML
<?xml version="1.0" encoding="UTF-8"?>
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<package>
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<name>VariantAnnotator</name>
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<executable>
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<name>VariantAnnotator</name>
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<main-class>org.broadinstitute.sting.gatk.CommandLineGATK</main-class>
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<properties>StingText.properties</properties>
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<dependencies>
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<!-- Variant annotator -->
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<class>org.broadinstitute.sting.gatk.walkers.annotator.VariantAnnotator</class>
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<!-- And the annotations -->
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<class>org.broadinstitute.sting.gatk.walkers.annotator.AlleleBalance</class>
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<class>org.broadinstitute.sting.gatk.walkers.annotator.DepthOfCoverage</class>
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<class>org.broadinstitute.sting.gatk.walkers.annotator.HomopolymerRun</class>
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<class>org.broadinstitute.sting.gatk.walkers.annotator.MappingQualityZero</class>
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<class>org.broadinstitute.sting.gatk.walkers.annotator.QualByDepth</class>
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<class>org.broadinstitute.sting.gatk.walkers.annotator.RMSMappingQuality</class>
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<class>org.broadinstitute.sting.gatk.walkers.annotator.SpanningDeletions</class>
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</dependencies>
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</executable>
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</package>
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