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hanna 2f3fbc145d A rethink of some of the modules from last night -- make the modules stand alone. 
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2637 348d0f76-0448-11de-a6fe-93d51630548a
 		2010-01-20 00:59:21 +00:00
..
Aligner.xml Update packaging system to produce multiple jars if asked nicely. 2009-12-03 17:11:12 +00:00
AnalyzeCovariatesModule.xml A rethink of some of the modules from last night -- make the modules stand alone. 2010-01-20 00:59:21 +00:00
CreatePackager.xsl Add new 'module' XML tag, that can import modules from supplementary files. 2010-01-19 01:56:04 +00:00
FindContaminatingReadGroupsModule.xml A rethink of some of the modules from last night -- make the modules stand alone. 2010-01-20 00:59:21 +00:00
FixBAMSortOrder.xml Added version numbers to the help doclet extractor. Since the help system is behaving 2010-01-15 23:31:29 +00:00
GATK-GSA-Pipeline.xml Port VariantEval and FindContaminatingReadGroups to modules. 2010-01-19 22:10:33 +00:00
GATK-Picard.xml Add new 'module' XML tag, that can import modules from supplementary files. 2010-01-19 01:56:04 +00:00
GATKResources.xml Added b37 reference files and dbsnp 130 rods to resources 2010-01-14 03:28:22 +00:00
GenomeAnalysisTK.xml Add new 'module' XML tag, that can import modules from supplementary files. 2010-01-19 01:56:04 +00:00
LocalRealignmentAroundIndelsModule.xml A rethink of some of the modules from last night -- make the modules stand alone. 2010-01-20 00:59:21 +00:00
PicardPrivate.xml Update packaging system to produce multiple jars if asked nicely. 2009-12-03 17:11:12 +00:00
QualityScoresRecalibrationModule.xml A rethink of some of the modules from last night -- make the modules stand alone. 2010-01-20 00:59:21 +00:00
UnifiedGenotyperModule.xml A rethink of some of the modules from last night -- make the modules stand alone. 2010-01-20 00:59:21 +00:00
VCFValidatorModule.xml A rethink of some of the modules from last night -- make the modules stand alone. 2010-01-20 00:59:21 +00:00
VariantAnnotatorModule.xml A rethink of some of the modules from last night -- make the modules stand alone. 2010-01-20 00:59:21 +00:00
VariantEvalModule.xml A rethink of some of the modules from last night -- make the modules stand alone. 2010-01-20 00:59:21 +00:00
VariantFiltrationModule.xml A rethink of some of the modules from last night -- make the modules stand alone. 2010-01-20 00:59:21 +00:00