gatk3的最后一个经典版本3.8

kshakir 2ec3852acd Scala classes were only returning direct subclasses (confirmed when inspected in debugger) so changed PluginManager to allow specifying the explicit subclass. ... Removed some generics from PluginManager for now until able to figure out syntax for requesting explicit subclass. QStatusMessenger uses a slightly more primitive Map[String, Seq[RemoteFile]] instead of Map[ArgumentSource, Seq[RemoteFile]]. Added an QCommandPlugin.initScript utility method for handling specialized script types.		2012-11-04 23:55:12 -05:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Merge remote-tracking branch 'unstable/master' into develop	2012-10-31 10:29:48 -04:00
public	Scala classes were only returning direct subclasses (confirmed when inspected in debugger) so changed PluginManager to allow specifying the explicit subclass.	2012-11-04 23:55:12 -05:00
settings	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00
.gitignore	adding some directories to gitignore	2012-10-10 13:26:13 -04:00
build.xml	Added mvninstall.queue.all target which includes private, along with supporting sub-targets.	2012-10-31 11:49:50 -04:00
intellij_example.tar.bz2	Adding intellij example files to the repo	2012-10-15 13:49:09 -04:00
ivy.xml	Updated google reflections due to stale slf4j version conflicting with other projects also trying to use Queue as a component.	2012-10-16 02:22:30 -04:00