Mark DePristo 2ebdff074c Update MD5s for SOLiD recalibration ... -- MD5 db had spelling error; fixed -- Bug in AlignmentUtils resulted in some bases not being color space corrected. The integration test caught the change, and it's clear that the new version is correct, as the prev. version was not considering the last the N qualities for reads with a ND operation.		2011-10-13 18:01:51 -04:00
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net/sf	Removed annoying FastaSequenceIndexBuilderProgressListener infrastructure that was just a boolean switch on whether to print progress or not.	2011-07-27 22:06:23 -04:00
org/broadinstitute/sting	Update MD5s for SOLiD recalibration	2011-10-13 18:01:51 -04:00