Ryan Poplin 2e5f9db758 Raising per-sample limits on the number of reads in ART and HC. ... -- Active Region Traversal was using per sample limits on the number of reads that were too low, especially now that we are running one sample at a time. This caused issues with high confidence variants being dropped in high coverage data. -- HaplotypeCallerGVCFIntegrationTest PL/annotation changes due to using more reads in those tests -- Removed a CountReadsInActiveRegionsIntegrationTest test for excessive coverage because the read coverage no longer goes over the limits in ART		2015-01-09 11:21:42 -05:00
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gatk-package-distribution	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
gatk-queue-extensions-distribution	Disabling tests for Lsf706 specific functionality.	2014-11-04 01:31:18 +08:00
gatk-queue-package-distribution	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
gatk-tools-protected	Raising per-sample limits on the number of reads in ART and HC.	2015-01-09 11:21:42 -05:00
pom.xml	Update pom versions to mark the start of GATK 3.4 development	2014-10-23 22:31:44 -04:00