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VectorPairHMM
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Removed g_haplotype* global variables in native code so that it works
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2014-03-06 22:08:35 -08:00 |
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c
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At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings.
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2012-01-17 14:47:53 -05:00 |
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chainFiles
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Reorganized the codebase beneath top-level public and private directories,
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2011-06-28 06:55:19 -04:00 |
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doc
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Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs)
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2013-03-12 10:57:14 -04:00 |
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external-example
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Update pom versions to mark the start of GATK 3.1 development
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2014-03-06 00:05:58 -05:00 |
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gatk-framework
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Merge pull request #563 from broadinstitute/aw_refactor_tribble
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2014-03-17 13:35:46 -04:00 |
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gatk-package
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Unconditionally include all of commons-httpclient in the GATK/Queue jars
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2014-03-14 10:50:15 -04:00 |
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gatk-queue-extgen
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Update pom versions to mark the start of GATK 3.1 development
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2014-03-06 00:05:58 -05:00 |
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gsalib
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Update pom versions to mark the start of GATK 3.1 development
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2014-03-06 00:05:58 -05:00 |
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java/config
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Moved files to maven directories.
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2014-02-03 13:50:44 -05:00 |
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package-tests
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Rename existing PipelineTests to QueueTests to prepare for upcoming push of new pipeline tests
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2014-03-10 21:24:03 -04:00 |
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perl
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Fixing the liftover script to not require strict VCF header validation.
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2013-11-07 09:02:17 -05:00 |
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queue-framework
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Rename existing PipelineTests to QueueTests to prepare for upcoming push of new pipeline tests
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2014-03-10 21:24:03 -04:00 |
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queue-package
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Unconditionally include all of commons-httpclient in the GATK/Queue jars
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2014-03-14 10:50:15 -04:00 |
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repo
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GATK changes to conform to Tribble refactoring as part improving Tabix support in Tribble (among other things).
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2014-03-17 11:56:22 -04:00 |
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sting-root
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GATK changes to conform to Tribble refactoring as part improving Tabix support in Tribble (among other things).
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2014-03-17 11:56:22 -04:00 |
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sting-utils
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Merge remote-tracking branch 'origin/master' into intel
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2014-03-10 14:07:36 -04:00 |
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pom.xml
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Rename existing PipelineTests to QueueTests to prepare for upcoming push of new pipeline tests
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2014-03-10 21:24:03 -04:00 |
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