Ryan Poplin 507853c583 Active region boundary parameters need to be bigger when running in GGA mode. CGL performance is quite a bit better as a result. ... -- The troule stems from the fact that we may be trying to genotype indels even though it appears there are only SNPs in the reads.		2013-05-20 14:29:04 -04:00
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java	Active region boundary parameters need to be bigger when running in GGA mode. CGL performance is quite a bit better as a result.	2013-05-20 14:29:04 -04:00
scala/test/org/broadinstitute/sting/queue/pipeline/examples	Fix improper dependencies in QScripts used by pipeline tests, and attempt to fix the flawed MisencodedBaseQualityUnitTest	2013-02-27 04:45:53 -05:00