gatk3的最后一个经典版本3.8

Christopher Hartl 2d093828a4 Final changes to Junky (been frozen for a while, but uncommitted) and the qscript for it. A first cursory implementation of the trellis-based Exact AC-constrained genotyping algorithm in UGE. Nothing calls into it, so this should be entirely safe (and, no surprise, it passes UG integration tests).		2012-01-03 15:33:04 -05:00
public	Final changes to Junky (been frozen for a while, but uncommitted) and the qscript for it. A first cursory implementation of the trellis-based Exact AC-constrained genotyping algorithm in UGE. Nothing calls into it, so this should be entirely safe (and, no surprise, it passes UG integration tests).	2012-01-03 15:33:04 -05:00
settings	Update Picard to fix a bug Mauricio found in Picard where Picard unnecessarily depends on Snappy during some usages of SortingCollection.	2011-12-29 14:35:02 -05:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Always use full, three-part version numbers.	2012-01-03 10:25:19 -05:00
ivy.xml	Let this one slip through my commits.	2011-12-26 21:55:02 -05:00