Laura Gauthier 25b8ba45f4 More allele-specific annotations: AS_QD and AS_InbreedingCoeff ... Grouped default output annotations to keep them from getting dropped when -A is specified; addresses #918 Also refactored code shared by ExcessHet and InbreedingCoeff		2015-11-09 16:38:31 -05:00
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main/java/org/broadinstitute/gatk/tools	More allele-specific annotations: AS_QD and AS_InbreedingCoeff	2015-11-09 16:38:31 -05:00
test/java/org/broadinstitute/gatk/tools	Finished draft of code for new map-combine-reduce annotation framework	2015-10-27 09:23:29 -04:00