kiran 2b0e7f612b Handles bam pileups where some of the reads have SQ tags and some don't. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@958 348d0f76-0448-11de-a6fe-93d51630548a		2009-06-10 08:17:15 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Handles bam pileups where some of the reads have SQ tags and some don't.	2009-06-10 08:17:15 +00:00
test/org/broadinstitute/sting	added tools to test read based traversals using the artificial in-memory SAM file tools, and testing of the PrintReadsWalker	2009-06-10 01:52:25 +00:00