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Mauricio Carneiro 1085df8b7b Making the BQSR pipeline publicly available and supported. 
this is for all the Pacbio validation that is going on right no in the cancer group. They are all using this script, and I'm happy to support it.
 		2011-06-29 16:05:32 -04:00
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DataProcessingPipeline.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
GATKResourcesBundle.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
MethodsDevelopmentCallingPipeline.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
RecalibrateBaseQualities.scala Making the BQSR pipeline publicly available and supported. 2011-06-29 16:05:32 -04:00
StandardVariantEvaluation.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00