Ryan Poplin 981b78ea50 Changing the VQSR command line syntax back to the parsed tags approach. This cleans up the code and makes sure we won't be parsing the same rod file multiple times. I've tried to update the appropriate qscripts.		2011-09-12 12:17:43 -04:00
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qscript/org/broadinstitute/sting/queue/qscripts	Changing the VQSR command line syntax back to the parsed tags approach. This cleans up the code and makes sure we won't be parsing the same rod file multiple times. I've tried to update the appropriate qscripts.	2011-09-12 12:17:43 -04:00
src/org/broadinstitute/sting/queue	Merged bug fix from Stable into Unstable	2011-09-09 01:34:55 -04:00
test/org/broadinstitute/sting/queue	Updates to JobRunners from the Queue developer community and from running the WholeGenomePipeline:	2011-08-22 15:13:27 -04:00