kshakir 8619f49d20 Added a utility method to retrieve the contig lengths for WG chunking. ... Added a rudimentary GATKReportParser for parsing VE3 results. Re-enabled the FCPTest using VE3, the GATKRP, and the PicardAggregationUtils. The tag type for .rod files is DBSNP, not ROD. More explicit return types on implicit methods. Added null checks for implicit string to/from file conversions. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5668 348d0f76-0448-11de-a6fe-93d51630548a		2011-04-20 19:22:21 +00:00
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IOUtilsUnitTest.scala	Updated PluginManager so that during testing Queue can dynamically compile and load separately multiple class directories into the same class loader.	2010-11-12 20:14:28 +00:00
ShellJobUnitTest.scala	Moved MD5 utils from WalkerTest to BaseTest for use by PipelineTests.	2011-01-25 04:11:49 +00:00
StringFileConversionsUnitTest.scala	Added a utility method to retrieve the contig lengths for WG chunking.	2011-04-20 19:22:21 +00:00
SystemUtilsUnitTest.scala	When @Gather annotation is missing (probably due to an unclean build) printing out the full field+class name for debugging purposes.	2011-03-30 21:43:37 +00:00