aaron 0f29f2ae3f fixes for the Tree index, and some small clean-up in the GATK. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3991 348d0f76-0448-11de-a6fe-93d51630548a		2010-08-09 20:41:50 +00:00
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net/sf/picard/reference	IndexedFastaSequenceFile is now in Picard; transitioning to that implementation.	2010-07-01 04:40:31 +00:00
org/broadinstitute/sting	fixes for the Tree index, and some small clean-up in the GATK.	2010-08-09 20:41:50 +00:00