Mark DePristo 29319bf222 Improved allele trimming code in GATKVariantContextUtils ... -- Now supports trimming the alleles from both the reverse and forward direction. -- Added lots of unit tests for forwrad allele trimming, as well as creating VC from forward and reverse trimming. -- Added docs and tests for the code, to bring it up to GATK spec		2013-02-21 12:01:43 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Improved allele trimming code in GATKVariantContextUtils	2013-02-21 12:01:43 -05:00
test	Improved allele trimming code in GATKVariantContextUtils	2013-02-21 12:01:43 -05:00