gatk3的最后一个经典版本3.8

Mauricio Carneiro 291d8c7596 Fixed HardClipping and Interval containment ... * Hard clipping was wrongfully hard clipping unmapped reads while soft clipping then hard clipping mapped reads. Now we throw exception if we try to hard/soft clip unmapped reads and use the soft->hard clip procedure fore every mapped read. * Interval containment needed a <= and >= to make sure it caught the borders right.		2011-08-14 14:54:33 -04:00
public	Fixed HardClipping and Interval containment	2011-08-14 14:54:33 -04:00
settings	The tribble dependency is now handled through ivy. Revved tribble to r18 and removed obsolete build targets in build.xml	2011-08-11 16:38:29 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Fixing the javadoc/scaladoc targets in build.xml	2011-08-11 19:24:41 -04:00
ivy.xml	The tribble dependency is now handled through ivy. Revved tribble to r18 and removed obsolete build targets in build.xml	2011-08-11 16:38:29 -04:00