Mark DePristo 243af0adb1 Expanded the BQSR reporting script ... -- Includes header page -- Table of arguments (Arguments) -- Summary of counts (RecalData0) -- Summary of counts by qual (RecalData1) -- Fixed bug in output that resulted in covariates list always being null (updated md5s accordingly) -- BQSR.R loads all relevant libaries now, include gplots, grid, and gsalib to run correctly		2012-08-12 13:45:14 -04:00
..
src/org/broadinstitute/sting	Adding support of X and = CIGAR operators to the GATK	2012-08-10 14:54:07 -04:00
test/org/broadinstitute/sting/gatk/walkers	Expanded the BQSR reporting script	2012-08-12 13:45:14 -04:00