weisburd 705b28e90d First attempt at implement record filtering based on special 'hap_ref', 'hap_alt' columns in the input files ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3118 348d0f76-0448-11de-a6fe-93d51630548a		2010-04-02 21:52:26 +00:00
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alignment	adding the initial ROD for Reads support; more convenience methods in ReadMetaDataTracker to come.	2010-03-03 15:56:44 +00:00
analyzecovariates	Removed the StingException when mkdir fails for Sendu in AnalyzeCovariates. Incremental updates to VariantOptimizer.	2010-03-16 19:45:02 +00:00
gatk	changed the depth of coverage walkers class name, and added a dependency in the packaging system so that RODs will all get imported.	2010-04-02 20:55:19 +00:00
oneoffprojects	CoverageStatistics has now replaced DepthOfCoverage -- old DoC is in the archive.	2010-04-01 16:27:23 +00:00
playground	First attempt at implement record filtering based on special 'hap_ref', 'hap_alt' columns in the input files	2010-04-02 21:52:26 +00:00
utils	Reorganizing the way interval arguments are processed	2010-04-01 12:47:48 +00:00