gatk-3.8/settings/repository/org.broad
Mark DePristo a90482c772 Rev. tribble to v101 with another putative open file leak fix
Scalability bugfixes; can issues tens of thousands of queries to an reader
without opening too many files

-- Fixed missing close() statement in TribbleIndexedFeatureReader
-- Fixed NPE in TabixIteratorLineReader
-- Added scalability test that confirms .query() failure and subsequent fix

Note this actually fixes a tested and reproducible scability issue.  Might not be the only one but I believe it should do the trick.  Sorry everyone for the inconvenience.  Note that we now have a test in Tribble to ensure this doesn't happen again.
2012-05-04 15:40:41 -04:00
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tribble-101.jar Rev. tribble to v101 with another putative open file leak fix 2012-05-04 15:40:41 -04:00
tribble-101.xml Rev. tribble to v101 with another putative open file leak fix 2012-05-04 15:40:41 -04:00