gatk-3.8/java
droazen 27b1418b84 PSP2 output much better. Good masking of repetitive regions. Flagging of invalid amplicons rather than omission of them, reasons properly given. Kiran doesn't like the trailing comma, but the trailing comma also doesn't like Kiran.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@6045 348d0f76-0448-11de-a6fe-93d51630548a
2011-06-22 22:54:27 +00:00
..
config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src PSP2 output much better. Good masking of repetitive regions. Flagging of invalid amplicons rather than omission of them, reasons properly given. Kiran doesn't like the trailing comma, but the trailing comma also doesn't like Kiran. 2011-06-22 22:54:27 +00:00
test Fixing broken walker as per GS; adding integration test to cover it. 2011-06-22 22:54:04 +00:00