Mark DePristo 569be953b9 Bugfix for VariantEval ... -- We weren't properly handling the case where a site had both a SNP and indel in both eval and comp. These would naturally pair off as SNP x SNP and INDEL x INDEL in eval, but we'd still invoke update2 with (null, SNP) and (null, INDEL) resulting most conspicously as incorrect false negatives in the validation report. -- Updating misc. integrationtests, as the counting of comps (in particular for dbSNP) was inflated because of this effect.		2012-03-06 16:56:59 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Bugfix for VariantEval	2012-03-06 16:56:59 -05:00
test	Bugfix for VariantEval	2012-03-06 16:56:59 -05:00