gatk3的最后一个经典版本3.8

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Khalid Shakir 26ba4c11aa Minor fixups for previous commit once tests (only runnable at Broad) were run. Fixed off by one error in size calculation IntervalUtils.scatterContigIntervals(). In test for fewer files than intervals, adjusted expected intervals. In test for more files than intervals, adjusted expected exception.		2014-10-22 17:37:37 +08:00
licensing	Updated license information	2014-10-14 17:10:12 -04:00
protected	Merge pull request #754 from broadinstitute/rhl_variant_array_exception	2014-10-21 12:01:52 -04:00
public	Minor fixups for previous commit once tests (only runnable at Broad) were run.	2014-10-22 17:37:37 +08:00
settings/helpTemplates	Output JSON version of docs for Galaxy	2014-10-09 06:42:25 -04:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Refactored maven directories and java packages replacing "sting" with "gatk".	2014-05-19 17:36:39 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Now passing in the path to the GATK directory to tests.	2014-09-02 01:40:59 +08:00

The Genome Analysis Toolkit