gatk3的最后一个经典版本3.8

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Yossi Farjoun 25fa25b618 Added option to validate gvcf (for ValidateVariants) (#1379 ) * with option --gvcf CLP will now put extra checks that a gvcf must adhere to (existance of <NON_REF> allele at every variant, and that the variants in total cover the entire requested intervals, or the whole genome if no intervals have been specified) * works on gvcf produced by HC when using either GVCF or BP_RESOLUTION mode * added positive and negative tests		2016-05-26 06:42:45 -04:00
.github	Add "GATK4 Implications" section to GATK3 pull request template	2016-05-06 13:39:47 -04:00
licensing	Update licenses	2016-03-05 01:09:43 -08:00
protected	Added option to validate gvcf (for ValidateVariants) (#1379 )	2016-05-26 06:42:45 -04:00
public	Added option to validate gvcf (for ValidateVariants) (#1379 )	2016-05-26 06:42:45 -04:00
settings/helpTemplates	Numerous doc fixes; mostly formatting and clarifications	2015-05-03 00:28:46 +02:00
.gitignore	Added issue and pull request templates	2016-04-04 13:27:45 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Update pom versions to mark the start of GATK 3.6 development	2015-11-25 01:52:51 -05:00

README.md

The Genome Analysis Toolkit

See http://www.broadinstitute.org/gatk/