Khalid Shakir 25aee7164e Fixed missing "mvn" command execution in ant-bridge. ... Added pom.xml workarounds for duplicate classpath error, due to gatk-framework dependency containing required BaseTest, and jarred *UnitTest/*IntegrationTest classes that also exist as files under target/test-classes.		2014-02-03 13:50:46 -05:00
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c	At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings.	2012-01-17 14:47:53 -05:00
chainFiles	…
doc	Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs)	2013-03-12 10:57:14 -04:00
external-example	Fixed missing "mvn" command execution in ant-bridge.	2014-02-03 13:50:46 -05:00
gatk-framework	Fixed missing "mvn" command execution in ant-bridge.	2014-02-03 13:50:46 -05:00
gatk-package	Added maven pom.xmls for various artifacts.	2014-02-03 13:50:46 -05:00
gatk-queue-extgen	Added maven pom.xmls for various artifacts.	2014-02-03 13:50:46 -05:00
gsalib	Added maven pom.xmls for various artifacts.	2014-02-03 13:50:46 -05:00
java/config	Moved files to maven directories.	2014-02-03 13:50:44 -05:00
package-tests	Fixed missing "mvn" command execution in ant-bridge.	2014-02-03 13:50:46 -05:00
perl	Fixing the liftover script to not require strict VCF header validation.	2013-11-07 09:02:17 -05:00
queue-framework	Added maven pom.xmls for various artifacts.	2014-02-03 13:50:46 -05:00
queue-package	Added maven pom.xmls for various artifacts.	2014-02-03 13:50:46 -05:00
repo	Switched commited dependency repository from ivy to maven.	2014-02-03 13:50:46 -05:00
sting-root	Fixed missing "mvn" command execution in ant-bridge.	2014-02-03 13:50:46 -05:00
sting-utils	Added maven pom.xmls for various artifacts.	2014-02-03 13:50:46 -05:00
pom.xml	Added maven pom.xmls for various artifacts.	2014-02-03 13:50:46 -05:00