Valentin Ruano-Rubio 258b2bce28 Fix loss of key alternative haplotypes due to a change on threading start policy required when recovering dangling heads. ... Story: - https://www.pivotaltracker.com/story/show/67601310 Change: - Unless recover-danging-heads is active, the threading starting location policy is the original one. i.e. just at already existing unique kmer vertices. Tests: - HaplotypeCallerIntegrationTest#testMissingKeyAlternativeHaplotypesBugFix		2014-03-29 22:40:26 -04:00
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gatk-protected	Fix loss of key alternative haplotypes due to a change on threading start policy required when recovering dangling heads.	2014-03-29 22:40:26 -04:00
pom.xml	Update pom versions to mark the start of GATK 3.2 development	2014-03-18 01:18:59 -04:00