aaron f4cfb0f990 The first step in integrating Jim's tree based index scheme: ... - changed to a better method for getting headers from Codecs - some removal of old commented out code in the GATKAgrumentCollection - changes for the rename of FeatureReader to FeatureSource - removed the old Beagle ROD - cleaned up some of the code in SampleUtils git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3826 348d0f76-0448-11de-a6fe-93d51630548a		2010-07-19 04:49:27 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	The first step in integrating Jim's tree based index scheme:	2010-07-19 04:49:27 +00:00
test	The first step in integrating Jim's tree based index scheme:	2010-07-19 04:49:27 +00:00