Mark DePristo 243af0adb1 Expanded the BQSR reporting script ... -- Includes header page -- Table of arguments (Arguments) -- Summary of counts (RecalData0) -- Summary of counts by qual (RecalData1) -- Fixed bug in output that resulted in covariates list always being null (updated md5s accordingly) -- BQSR.R loads all relevant libaries now, include gplots, grid, and gsalib to run correctly		2012-08-12 13:45:14 -04:00
..
config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Expanded the BQSR reporting script	2012-08-12 13:45:14 -04:00
test	"update integration tests in CombineVariantsIntegrationTest"	2012-08-10 17:00:35 -04:00