Mark DePristo a281fa6548 Resolves Genome Sequence Analysis GSA-750 Don't print an endless series of starting messages from the ProgressMeter ... -- The progress meter isn't started until the GATK actually calls execute on the microscheduler. Now we get a message saying "Creating shard strategy" while this (expensive) operation runs		2013-02-04 15:47:30 -05:00
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commandline	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
gatk	Final cleanup and unit testing for GATKRunReport	2013-02-02 15:06:56 -05:00
jna	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
utils	Resolves Genome Sequence Analysis GSA-750 Don't print an endless series of starting messages from the ProgressMeter	2013-02-04 15:47:30 -05:00
BaseTest.java	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
ExampleToCopyUnitTest.java	UnitTesting example for copying	2013-01-30 11:19:08 -05:00
MD5DB.java	Encrypt GATK AWS keys using the GATK private key, and decrypt as needed as a resource when uploading to AWS logs	2013-01-30 16:42:23 -05:00
MD5Mismatch.java	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
StingTextReporter.java	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
TestNGTestTransformer.java	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
WalkerTest.java	Move some VCF/VariantContext methods back to the GATK based on feedback	2013-01-29 16:56:55 -05:00