gatk3的最后一个经典版本3.8

David Roazen 236eb54abd Trivial script to publish private unstable jars for group use ... -Jars will get updated every time the "Serial Commit Tests" plan in Bamboo passes on the master branch -Differs from the nightly builds in that it includes "private" and has actually passed the test suite -latest jar is always located at: /humgen/gsa-hpprojects/GATK/private_unstable_builds/GenomeAnalysisTK_latest_unstable.jar		2013-03-15 16:00:59 -04:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected	Bug fix in assembly for edge case in which the extendPartialHaplotype function was filling in deletions in the middle of haplotypes.	2013-03-15 14:20:25 -04:00
public	Merge pull request #108 from broadinstitute/eb_bqsr_out_of_bounds_fix	2013-03-14 17:29:35 -07:00
settings	Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs)	2013-03-12 10:57:14 -04:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Fix tests that were consistently or intermittently failing when run in parallel on the farm	2013-03-06 13:56:54 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00