Mark DePristo 233f70f8ba Final cleanup of TraversalProgressMeters, moved to utils.progressmeter ... -- TraversalProgressMeter now completely generalized, named ProgressMeter in utils.progressmeter. Now just takes "nRecordsProcessed" as an argument to print reads. Completely removes dependence on complex data structures from TraversalProgressMeter. Can be used to measure progress on any task with processing units in genomic locations. -- a fairly simple, class with no dependency on GATK engine or other features. -- Currently only used by the TraversalEngine / MicroScheduler but could be used for any purpose now, really.		2012-09-10 20:14:14 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Final cleanup of TraversalProgressMeters, moved to utils.progressmeter	2012-09-10 20:14:14 -04:00
test	Refactor TraversalEngine to extract the progress meter functions	2012-09-10 20:14:13 -04:00