| .. |
|
VectorPairHMM
|
Removed g_haplotype* global variables in native code so that it works
|
2014-03-06 22:08:35 -08:00 |
|
c
|
At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings.
|
2012-01-17 14:47:53 -05:00 |
|
chainFiles
|
The contig is named MT not M in b36. Delivers PT68890442.
|
2014-04-08 10:03:47 -04:00 |
|
doc
|
Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs)
|
2013-03-12 10:57:14 -04:00 |
|
external-example
|
Update pom versions to mark the start of GATK 3.2 development
|
2014-03-18 01:18:59 -04:00 |
|
gatk-framework
|
Test that stdout redirects and log files do not affect output
|
2014-04-09 13:52:42 -04:00 |
|
gatk-package
|
Update pom versions to mark the start of GATK 3.2 development
|
2014-03-18 01:18:59 -04:00 |
|
gatk-queue-extgen
|
Update pom versions to mark the start of GATK 3.2 development
|
2014-03-18 01:18:59 -04:00 |
|
gsalib
|
Update pom versions to mark the start of GATK 3.2 development
|
2014-03-18 01:18:59 -04:00 |
|
java/config
|
Moved files to maven directories.
|
2014-02-03 13:50:44 -05:00 |
|
package-tests
|
Update pom versions to mark the start of GATK 3.2 development
|
2014-03-18 01:18:59 -04:00 |
|
perl
|
Fixing the liftover script to not require strict VCF header validation.
|
2013-11-07 09:02:17 -05:00 |
|
queue-framework
|
Update pom versions to mark the start of GATK 3.2 development
|
2014-03-18 01:18:59 -04:00 |
|
queue-package
|
Update pom versions to mark the start of GATK 3.2 development
|
2014-03-18 01:18:59 -04:00 |
|
repo
|
Extend on-the-fly sample renaming feature to vcfs
|
2014-04-08 11:07:00 -04:00 |
|
sting-root
|
Extend on-the-fly sample renaming feature to vcfs
|
2014-04-08 11:07:00 -04:00 |
|
sting-utils
|
Update pom versions to mark the start of GATK 3.2 development
|
2014-03-18 01:18:59 -04:00 |
|
pom.xml
|
Update pom versions to mark the start of GATK 3.2 development
|
2014-03-18 01:18:59 -04:00 |
c84126205b