Ryan Poplin 21334e728d Merge pull request #252 from broadinstitute/md_bqsr_index_out_of_bounds ... Make BQSR calculateIsIndel robust to indel CIGARs are start/end of read		2013-06-03 07:13:00 -07:00
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java	Merge pull request #252 from broadinstitute/md_bqsr_index_out_of_bounds	2013-06-03 07:13:00 -07:00
scala/test/org/broadinstitute/sting/queue/pipeline/examples	Fix improper dependencies in QScripts used by pipeline tests, and attempt to fix the flawed MisencodedBaseQualityUnitTest	2013-02-27 04:45:53 -05:00