gatk3的最后一个经典版本3.8

Ryan Poplin 21334e728d Merge pull request #252 from broadinstitute/md_bqsr_index_out_of_bounds ... Make BQSR calculateIsIndel robust to indel CIGARs are start/end of read		2013-06-03 07:13:00 -07:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected	Merge pull request #252 from broadinstitute/md_bqsr_index_out_of_bounds	2013-06-03 07:13:00 -07:00
public	Fix error in merging code in HC	2013-05-31 16:29:29 -04:00
settings	Rev picard, sam-jdk, tribble, and variant to version 1.91.1453	2013-05-07 14:21:15 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
build.xml	Restore scala compilation by default in build.xml	2013-05-31 11:28:29 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00