Eric Banks bad7865078 When converting a haplotype to a set of variants we now check for cases that are overly complex. ... In these cases, where the alignment contains multiple indels, we output a single complex variant instead of the multiple partial indels. We also re-enable dangling tail recovery by default.		2014-07-01 14:18:59 -04:00
..
gatk-package-distribution	If passed -Pgsadev, don't build the distribution package.	2014-06-10 23:33:33 -04:00
gatk-queue-extensions-distribution	Disabled ExampleUG Queue Tests, fixed internal extensions dependency.	2014-05-27 16:16:53 -04:00
gatk-queue-package-distribution	If passed -Pgsadev, don't build the distribution package.	2014-06-10 23:33:33 -04:00
gatk-tools-protected	When converting a haplotype to a set of variants we now check for cases that are overly complex.	2014-07-01 14:18:59 -04:00
pom.xml	Refactored maven directories and java packages replacing "sting" with "gatk".	2014-05-19 17:36:39 -04:00