kshakir 81479229e1 QScript authors can now tag functions as intermediate. Functions tagged as intermediate will be skipped unless another function in the graph needs their output. ... Re-logging the failed jobs and the path to their log files at the end of a run. Added a parameter -bigMemQueue for the fullCallingPipeline.q instead of hardcoding gsa (gsa was backed up and it was actually faster to run on week). git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4520 348d0f76-0448-11de-a6fe-93d51630548a		2010-10-18 22:11:14 +00:00
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chartl	Added - a tool to fix reference bases of a VCF. The OMNI had a couple of sites with incorrect reference bases (look to be legacy from other chips), and a few more that had ref and alt flipped. GAP should probably take care of it, but since I need results by monday, I'm doing it.	2010-10-17 03:18:01 +00:00
depristo	More Queue scripts for analysis	2010-09-12 14:04:10 +00:00
examples	Fixed VariantEval rod binding names.	2010-09-24 14:52:51 +00:00
kshakir	While bkill'ing on the shutdown thread Queue will no longer try to submit more jobs on the original thread.	2010-10-15 17:01:36 +00:00
rpoplin	At chartl's superb suggestion, command line files are now all Files instead of old method of sometimes "has a File". Should be easier when reassigning them.	2010-09-02 21:30:48 +00:00
fullCallingPipeline.q	QScript authors can now tag functions as intermediate. Functions tagged as intermediate will be skipped unless another function in the graph needs their output.	2010-10-18 22:11:14 +00:00
recalibrate.scala	At chartl's superb suggestion, command line files are now all Files instead of old method of sometimes "has a File". Should be easier when reassigning them.	2010-09-02 21:30:48 +00:00