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Khalid Shakir 9ca3004fc3 Setting the test-utils' type to test-jar, such that the multi-module build uses testClasses instead of classes as a directory dependency. 2014-02-03 13:50:46 -05:00
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c At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings. 2012-01-17 14:47:53 -05:00
chainFiles
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doc Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs) 2013-03-12 10:57:14 -04:00
external-example Setting the test-utils' type to test-jar, such that the multi-module build uses testClasses instead of classes as a directory dependency. 2014-02-03 13:50:46 -05:00
gatk-framework Setting the test-utils' type to test-jar, such that the multi-module build uses testClasses instead of classes as a directory dependency. 2014-02-03 13:50:46 -05:00
gatk-package Added maven pom.xmls for various artifacts. 2014-02-03 13:50:46 -05:00
gatk-queue-extgen Added maven pom.xmls for various artifacts. 2014-02-03 13:50:46 -05:00
gsalib Added maven pom.xmls for various artifacts. 2014-02-03 13:50:46 -05:00
java/config Moved files to maven directories. 2014-02-03 13:50:44 -05:00
package-tests Setting the test-utils' type to test-jar, such that the multi-module build uses testClasses instead of classes as a directory dependency. 2014-02-03 13:50:46 -05:00
perl Fixing the liftover script to not require strict VCF header validation. 2013-11-07 09:02:17 -05:00
queue-framework Setting the test-utils' type to test-jar, such that the multi-module build uses testClasses instead of classes as a directory dependency. 2014-02-03 13:50:46 -05:00
queue-package Added maven pom.xmls for various artifacts. 2014-02-03 13:50:46 -05:00
repo Switched commited dependency repository from ivy to maven. 2014-02-03 13:50:46 -05:00
sting-root Fixed missing "mvn" command execution in ant-bridge. 2014-02-03 13:50:46 -05:00
sting-utils One step closer to a proper test-utils artifact. Using the maven-jar-plugin to create a test classifer, excluding actual tests, until we can properly separate the classes into separate artifacts/modules. 2014-02-03 13:50:46 -05:00
pom.xml Added maven pom.xmls for various artifacts. 2014-02-03 13:50:46 -05:00