gatk3的最后一个经典版本3.8

David Roazen 1fb182d951 Restore Utils.appendArray() ... This utility method was used by the PipelineTest class, and deleting it was causing tests to not compile.		2013-02-01 13:51:31 -05:00
licensing	Refrain from pushing symlinks into the repo... not all filesystems treat it correctly	2013-01-22 15:18:19 -07:00
protected/java	Expanded unit tests for AlignmentUtils	2013-02-01 13:51:31 -05:00
public	Restore Utils.appendArray()	2013-02-01 13:51:31 -05:00
settings	Rev picard, sam-jdk, and tribble	2013-02-01 13:51:30 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Move AWS keys to a resources subdirectory within the phonehome package	2013-01-31 11:56:34 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00