Mark DePristo 1fa5050faf Cleanup, unit test, and optimize KBestPaths and Path ... -- Split Path from inner class of KBestPaths -- Use google MinMaxPriorityQueue to track best k paths, a more efficient implementation -- Path now properly typed throughout the code -- Path maintains a on-demand hashset of BaseEdges so that path.containsEdge is fast		2013-03-20 22:54:36 -04:00
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gatk/walkers	Cleanup, unit test, and optimize KBestPaths and Path	2013-03-20 22:54:36 -04:00
utils	Expanded functionality for writing BAMs from HaplotypeCaller	2013-03-03 12:07:29 -05:00