gatk3的最后一个经典版本3.8

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Geraldine Van der Auwera 1f8e45f0ba Merge pull request #1243 from broadinstitute/gvda_rodwalkers_dont_downsample_1179 Fix bug where gatkdocs of RodWalkers reported default LocusWalker downsampling settings		2015-11-23 21:39:43 -05:00
licensing	Updated licenses for 2015	2015-08-06 15:23:11 -04:00
protected	Merge pull request #1231 from broadinstitute/mf_fixBQSRIntegrationTest	2015-11-23 17:08:30 -05:00
public	Fix bug where gatkdocs of RodWalkers reported default LocusWalker downsampling settings	2015-11-23 17:53:19 -05:00
settings/helpTemplates	Numerous doc fixes; mostly formatting and clarifications	2015-05-03 00:28:46 +02:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Using `SamIndexes.asBaiSeekableStreamOrNull()` to support `.cram.crai`.	2015-09-14 12:20:36 -04:00

The Genome Analysis Toolkit