ebanks 47440bc029 - Removed max_coverage argument from UG; Aaron will set it up so that we don't call when the GATK had to drop reads. ... - Reimplemented optimization in UG to not call when there are no non-ref bases. - Compute reference confidence accurately in UG for ref calls. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2693 348d0f76-0448-11de-a6fe-93d51630548a		2010-01-26 21:56:33 +00:00
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broadinstitute/sting	- Removed max_coverage argument from UG; Aaron will set it up so that we don't call when the GATK had to drop reads.	2010-01-26 21:56:33 +00:00