Laurent Francioli 1f044faedd - Genotype assignment in case of equally likeli combination is now random ... - Genotype combinations with 0 confidence are now left unphased		2011-10-26 19:57:09 +02:00
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alignment	Merge branch 'master' of ssh://chartl@tin.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/unstable	2011-07-19 20:25:33 -04:00
analyzecovariates	Forgot that no matter how trivial a change it's a good idea to compile first	2011-10-11 11:18:41 -04:00
commandline	Patch from Laurent: typo leads to bad error messages.	2011-09-12 14:45:53 -04:00
gatk	- Genotype assignment in case of equally likeli combination is now random	2011-10-26 19:57:09 +02:00
jna	Updates to JobRunners from the Queue developer community and from running the WholeGenomePipeline:	2011-08-22 15:13:27 -04:00
pipeline	Cleanup of the utils.broad package.	2011-07-01 20:47:03 -04:00
queue	Fixed Queue's tagging of RodBindings.	2011-08-21 02:34:20 -04:00
utils	GQ calculation corrected for most likely genotype	2011-10-26 14:40:04 +02:00