1cb4b99548
Moved top level target symlinks to package jar files to under target/package. Executable jar files are placed under target/executable with the new target[/lib] directories. Under top level target, symlinks to *either* the package *or* the executable jars replace what was a symlink to the package jar path. Allow disabling of the shade package. ant-bridge.sh by default only builds executable jars, and doesn't package by default, as did the old ant build.xml. Added a new package_path.sh utility script for other scripts to use instead of anything in the target folder. |
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| .. | ||
| VectorPairHMM | ||
| c | ||
| chainFiles | ||
| doc | ||
| external-example | ||
| gatk-engine | ||
| gatk-queue | ||
| gatk-queue-extensions-generator | ||
| gatk-queue-extensions-public | ||
| gatk-root | ||
| gatk-tools-public | ||
| gatk-utils | ||
| gsalib | ||
| java/config | ||
| package-tests | ||
| perl | ||
| repo | ||
| src/main | ||
| pom.xml | ||