ebanks 1c4ca9d383 -Mark just reminded me: actually force the ref/loc to be immutable ... -VCF writer should be blind to the score/confidence/lod value - just print the thing out as is git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1932 348d0f76-0448-11de-a6fe-93d51630548a		2009-10-29 13:41:53 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	-Mark just reminded me: actually force the ref/loc to be immutable	2009-10-29 13:41:53 +00:00
test/org/broadinstitute/sting	now that the design is stable, pull the setReference and setLocation methods back out of Genotype and stick them into constructors of implementing classes	2009-10-29 13:27:37 +00:00