hanna 7c386fa428 Another case of reordering of read groups blowing up checksums. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2030 348d0f76-0448-11de-a6fe-93d51630548a		2009-11-13 00:07:35 +00:00
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gatk	Another case of reordering of read groups blowing up checksums.	2009-11-13 00:07:35 +00:00
playground/gatk/walkers	-Generalized the GenotypeConcordance module to deal with any number of individuals (although it will default to its old behavior if the -samples argument is left out).	2009-11-01 05:35:47 +00:00
utils	now that the design is stable, pull the setReference and setLocation methods back out of Genotype and stick them into constructors of implementing classes	2009-10-29 13:27:37 +00:00
BaseTest.java	Added some code to change the instrumentation for tests.	2009-05-20 05:15:27 +00:00
TrivialInstrumenter.java	fixed a bunch of comments and license headers.	2009-06-10 14:10:46 +00:00
WalkerTest.java	Enabling correct high-performance ROD walker and moved VariantEval over to it. Performance improvements in variantEval in general. See wiki for full description	2009-10-20 23:31:13 +00:00