gatk-3.8/settings/helpTemplates/generic.index.template.html

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HTML

<!--
~ Copyright (c) 2012, The Broad Institute
~
~ Permission is hereby granted, free of charge, to any person
~ obtaining a copy of this software and associated documentation
~ files (the "Software"), to deal in the Software without
~ restriction, including without limitation the rights to use,
~ copy, modify, merge, publish, distribute, sublicense, and/or sell
~ copies of the Software, and to permit persons to whom the
~ Software is furnished to do so, subject to the following
~ conditions:
~
~ The above copyright notice and this permission notice shall be
~ included in all copies or substantial portions of the Software.
~ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
~ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
~ OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
~ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
~ HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
~ WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
~ FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
~ OTHER DEALINGS IN THE SOFTWARE.
-->
<#include "common.html"/>
<#macro emitGroup group>
<div class="accordion-group">
<div class="accordion-heading">
<a class="accordion-toggle" data-toggle="collapse" data-parent="#index" href="#${group.id}">
<h4>${group.name}</h4>
</a>
</div>
<div class="accordion-body collapse" id="${group.id}">
<div class="accordion-inner">
<p class="lead">${group.summary}</p>
<table class="table table-striped table-bordered table-condensed">
<tr>
<th>Name</th>
<th>Summary</th>
</tr>
<#list data as datum>
<#if datum.group == group.name>
<tr>
<td><a href="${datum.filename}">${datum.name}</a></td>
<td>${datum.summary}</td>
</tr>
</#if>
</#list>
</table>
</div>
</div>
</div>
</#macro>
<@makeHeader title="GATK | Tool Documentation Index" isIndex=true />
<h1>Tool Documentation Index
<small>${version}</small>
</h1>
<div class="accordion" id="index">
<#assign seq = ["engine", "tools", "utilities", "other", "dev"]>
<#list seq as supercat>
<hr>
<#list groups?sort_by("name") as group>
<#if group.supercat == supercat>
<@emitGroup group=group/>
</#if>
</#list>
</#list>
</div>
<@footerInfo />
<@footerClose />
<@pageFooter />