gatk3的最后一个经典版本3.8

Mark DePristo 1ac09ca81e More bugfixes on the way to a final push with new Exact model framework ... -- UnifiedGenotyperEngine uses only the alleles used in genotyping, not the original alleles, when considering which alleles to include in output -- AFCalcFactory has a more informative info message when looking for and selecting an exact model to use in genotyping		2012-10-15 07:53:57 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Finalizing new exact model and tests	2012-10-15 07:53:57 -04:00
public	More bugfixes on the way to a final push with new Exact model framework	2012-10-15 07:53:57 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	a few more useful git ignores	2012-09-01 11:08:36 -04:00
build.xml	Proper error handling in NanoScheduler	2012-09-19 17:03:13 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00