gatk3的最后一个经典版本3.8

Eric Banks 19e2b5f0d5 RR optimization: since total count in BaseCounts is requested so often, don't keep computing it from scratch each time.		2012-10-17 00:44:23 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	RR optimization: since total count in BaseCounts is requested so often, don't keep computing it from scratch each time.	2012-10-17 00:44:23 -04:00
public	BQSR: tool to profile the effects of more-granular locking on scalability by # of threads	2012-10-16 14:43:16 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	a few more useful git ignores	2012-09-01 11:08:36 -04:00
build.xml	Proper error handling in NanoScheduler	2012-09-19 17:03:13 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00